Wednesday, July 28, 2010

RNASeq@bioserver

galaxy@bioserver>java -Xmx2G -jar /home/galaxy/tools/USeq_6.7/Apps/RNASeq
-y eland
-v D_rerio_Dec_2008
-c /home/galaxy/tmp/OverDispersedRNASeqDataset/Novoalignments/Control
-t /home/galaxy/tmp/OverDispersedRNASeqDataset/Novoalignments/Treatment
-g /home/galaxy/tmp/OverDispersedRNASeqDataset/hg19EnsGenes.ucsc
-s /home/galaxy/tmp/hello
-r /home/galaxy/tools/R-2.11.1/bin/R

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