Thursday, October 27, 2011

Known SNPs

Three VCF Files for known SNPs from GATK resource

1000G_omni2.5.hg19.sites.vcf -> hg19.1000G_omni2.5.vcf
hapmap_3.3.hg19.sites.vcf -> hg19.hapmap_3.3.vcf
dbsnp_132.hg19.vcf -> hg19.dbsnp_132.vcf

Also copy corresponding ".idx" files to DATA_PATH
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